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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015801034.1_cds_XP_016472628.1_6450
CDS Infomation

[gene=LOC107794628] [db_xref=GeneID:107794628] [protein=1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic-like] [protein_id=XP_016472628.1] [location=complement(join(3101..3133,3379..3433,3616..3701,5390..5494,5968..6048,6936..7043,7137..7214,7804..7908,8046..8117,8214..8351,8652..8754,9078..9179,12547..12637,14467..14574,21037..21112,24051..24140,24484..24762))] [gbkey=CDS]
Sequence

ATGTTGATTTCATTTCGTATTTTGTTTGCTACCCTGAGCCGACAAGGCCTTCTTTGTTTT
CTGGGATTTGTATTGATGTTGCTGAACTTCCTTTGCTCATTCGCAGATGCCGATGGGAAG
CAAGCATTGGCAGTTCATTGGGAACCACCTCCGGAAAGTGCTTACAAGTGGAAACACAAA
CATCCTCTCAAGCCTAAGTCATTGCGCATATATGAATGTCACGTCGGTATCTGCAGCCAG
GAACCAAAAGTTTCTTCTTTCAGTGATTTTATTAGCAAGGTTCTTCCACATGCAAAAGAA
GCTGGATACAATGCAATACAATTAATTGGAGTTGTTGAGCACAAGGATTATTTCACTGTT
GGATATAGAGTGACAAACTTTTATGCTGTTAGTAGCCGTTTTGGCACACCGGATGACTTC
AAGCGCTTGGTTGATGAAGCACATGGGCTTGGACTGCTTGTCTTTTTGGAGATTGTGCAC
TCTTATGCAGCAGCAGACGAAATGGTTGGATTATCTCTTTTTGATGGAACAAATGACTGC
TATTTCCATACTGGTAAACGTGGAAATCACAAATTCTGGGGCACACGAATGTTCAAATAT
GGAGATCTTGATGTTCTACACTTTCTTCTTTCAAATCTGAACTGGTGGGTGGAGGAGTAT
CATGTTGATGGATTCCATTTTCATTCACTCTCATCCATGCTGTATACACACAATGGATTT
GCTTCATTTACTGGTGACATGGATGAGTACTGTAACCAGTATGTTGACAAGGAGGCCTTA
TTGTACCTCATATTAGCAAATGAAGTATTGCATGCTCTTCACCCAAATGTGATCACGATT
GCCGAGGATGCAACCCTGTATCCGGGACTTTGTGACCCAACTTCTCAAGGTGGACTGGGC
TTTGATTATTTTGTGAATCTTTCTGCCTCGGAGATGTGGCTTGCATTACTTGAAAATACT
CCTGATCATGAATGGTCCATGAGTAAGATTGTTAGCACATTAATGGGTGGCCGACAAAAT
GTTGATAAGATGCTTTTGTATGCTGAAAATCACAACCAGTCCATTTCTGGAGGTCGCTCA
TTTGCAGAAATACTGATTGGTAACTCCTCGCGAAAATCTCCTGCATCACAAGAGTCATTC
CTTAGAGGCTGCTCGTTGTACAAGATGATCAGATTAATTACATCTACAATTGGTGGTCAT
GCATACCTCAACTTCATGGGCAATGAATTTGGTCATCCAAAGAGGGTTGAGTTTCCCATG
CCAAACAACAATTTCTCATTTTCACTAGCTAACCGTCAGTGGGATCTGTTGGAAAATGAC
GTACATAATCAATTGTTCTCATTTGATAAGGATATGATGGACTTGCATGAAAATGGGAGA
ATTTTGTCTCGAGGTCTTGCCAACATTCACCATGTCAATGATACTACCATGGTGATTTCT
TACTTGAGAGGCCCCAATCTCTTTGTGTTCAACTTTCATCCTGTCAATGCATATGAAAGA
TACACTATAGGTGTGGAAGAAGCTGGAGAGTATCAAGTCACATTAAATACAGATGAAAAG
AAGTATGGCGGTAGAGGACTGATTGGACATGATCATATTGTTCAAAGAACCATTAGTAGA
AGAGCTGATGGAATGAGATTTTGCTTGGAAGTGCCTCTACCAAGTAGAAGTGCTCAGGTC
TACAAGTTGACTCGAATTCTTAGAGTATGA

Peptide Sequence

PEP ID

XP_016472628.1
PEP Infomation

PREDICTED: 1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic-like [Nicotiana tabacum]
Sequence

MLISFRILFATLSRQGLLCFLGFVLMLLNFLCSFADADGKQALAVHWEPPPESAYKWKHK
HPLKPKSLRIYECHVGICSQEPKVSSFSDFISKVLPHAKEAGYNAIQLIGVVEHKDYFTV
GYRVTNFYAVSSRFGTPDDFKRLVDEAHGLGLLVFLEIVHSYAAADEMVGLSLFDGTNDC
YFHTGKRGNHKFWGTRMFKYGDLDVLHFLLSNLNWWVEEYHVDGFHFHSLSSMLYTHNGF
ASFTGDMDEYCNQYVDKEALLYLILANEVLHALHPNVITIAEDATLYPGLCDPTSQGGLG
FDYFVNLSASEMWLALLENTPDHEWSMSKIVSTLMGGRQNVDKMLLYAENHNQSISGGRS
FAEILIGNSSRKSPASQESFLRGCSLYKMIRLITSTIGGHAYLNFMGNEFGHPKRVEFPM
PNNNFSFSLANRQWDLLENDVHNQLFSFDKDMMDLHENGRILSRGLANIHHVNDTTMVIS
YLRGPNLFVFNFHPVNAYERYTIGVEEAGEYQVTLNTDEKKYGGRGLIGHDHIVQRTISR
RADGMRFCLEVPLPSRSAQVYKLTRILRV

Transcript Sequence

Gene sequence data has not been registered.